NGCHM - Next Generation Clustered Heat Maps

Next-Generation Clustered Heat Maps (NG-CHMs) allow for dynamic exploration of heat map data in a web browser. 'NGCHM' allows users to create both stand-alone HTML files containing a Next-Generation Clustered Heat Map, and .ngchm files to view in the NG-CHM viewer. See Ryan MC, Stucky M, et al (2020) <doi:10.12688/f1000research.20590.2> for more details.

Last updated 1 months ago

heatmapnci-itcrng-chm

5.41 score 7 stars 27 scripts 599 downloads

tsvio - Simple Utilities for Tab-Separated-Value (TSV) Files

Utilities for rapidly loading specified rows and/or columns of data from large tab-separated value (tsv) files (large: e.g. 1 GB file of 10000 x 10000 matrix). 'tsvio' is an R wrapper to 'C' code that creates an index file for the rows of the tsv file, and uses that index file to collect rows and/or columns from the tsv file without reading the whole file into memory.

Last updated 12 months ago

4.18 score 1 stars 1 packages 4 scripts 593 downloads

tsvio - Simple Utilities for Tab-Separated-Value (TSV) Files

Utilities for rapidly loading specified rows and/or columns of data from large tab-separated value (tsv) files (large: e.g. 1 GB file of 10000 x 10000 matrix). 'tsvio' is an R wrapper to 'C' code that creates an index file for the rows of the tsv file, and uses that index file to collect rows and/or columns from the tsv file without reading the whole file into memory.

Last updated 12 months ago

4.18 score 1 stars 1 packages 4 scripts 606 downloads

NGCHMSupportFiles - Support Files for Building Next Generation Clustered Heat Maps (NG-CHMs)

Support files required by the 'NGCHM' package to export Next-Generation Clustered Heat Maps (NG-CHMs) to .ngchm, HTML, and PDF files. These support files are updated mostly independently from the 'NGCHM' package, and are therefore provided separately.

Last updated 5 months ago

2.88 score 19 scripts

NGCHMSupportFiles - Support Files for Building Next Generation Clustered Heat Maps (NG-CHMs)

Support files required by the 'NGCHM' package to export Next-Generation Clustered Heat Maps (NG-CHMs) to .ngchm, HTML, and PDF files. These support files are updated mostly independently from the 'NGCHM' package, and are therefore provided separately.

Last updated 5 months ago

2.88 score 19 scripts

NGCHMDemoData - Demo Data for the NGCHM R Package

Package of demo data for NGCHM vignettes.

Last updated 5 months ago

2.23 score 17 scripts

NGCHMDemoData - Demo Data for the NGCHM R Package

Package of demo data for NGCHM vignettes.

Last updated 5 months ago

2.23 score 17 scripts