This package is considered a duplicate. The official version of this package is found at:https://md-anderson-bioinformatics.r-universe.dev/NGCHMDemoData
Package: NGCHMDemoData 1.0.0
NGCHMDemoData: Demo Data for the NGCHM R Package
Package of demo data for NGCHM vignettes.
Authors:
NGCHMDemoData_1.0.0.tar.gz
NGCHMDemoData_1.0.0.zip(r-4.5)NGCHMDemoData_1.0.0.zip(r-4.4)NGCHMDemoData_1.0.0.zip(r-4.3)
NGCHMDemoData_1.0.0.tgz(r-4.5-any)NGCHMDemoData_1.0.0.tgz(r-4.4-any)NGCHMDemoData_1.0.0.tgz(r-4.3-any)
NGCHMDemoData_1.0.0.tar.gz(r-4.5-noble)NGCHMDemoData_1.0.0.tar.gz(r-4.4-noble)
NGCHMDemoData_1.0.0.tgz(r-4.4-emscripten)NGCHMDemoData_1.0.0.tgz(r-4.3-emscripten)
NGCHMDemoData.pdf |NGCHMDemoData.html✨
NGCHMDemoData/json (API)
| # Install 'NGCHMDemoData' in R: |
| install.packages('NGCHMDemoData', repos = c('https://marohrdanz.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/md-anderson-bioinformatics/ngchmdemodata/issues
Datasets:
- TCGA.BRCA.ExpressionData - A subset of the breast cancer (BRCA) expression data from TCGA
- TCGA.BRCA.TP53MutationData - TP53 mutation data for TCGA breast cancer (BRCA) samples
- TCGA.GBM.EXPR - Glioblastoma Multiforme (GBM) microarray expression data from TCGA
- TCGA.GBM.ExpressionData - Glioblastoma Multiforme (GBM) RNASeq expression data from TCGA
- TCGA.GBM.TP53MutationData - TP53 mutation data for TCGA glioblastoma multiforme (GBM) samples
Last updated 8 months agofrom:a224a5261e. Checks:1 OK, 7 WARNING. Indexed: no.
| Target | Result | Latest binary |
|---|---|---|
| Doc / Vignettes | OK | Feb 06 2025 |
| R-4.5-win | WARNING | Feb 06 2025 |
| R-4.5-mac | WARNING | Feb 06 2025 |
| R-4.5-linux | WARNING | Feb 06 2025 |
| R-4.4-win | WARNING | Feb 06 2025 |
| R-4.4-mac | WARNING | Feb 06 2025 |
| R-4.3-win | WARNING | Feb 06 2025 |
| R-4.3-mac | WARNING | Feb 06 2025 |
Exports:
Dependencies:
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| NGCHMDemoData | NGCHMDemoData-package NGCHMDemoData |
| A subset of the breast cancer (BRCA) data from TCGA. | TCGA.BRCA.Demo |
| A subset of the breast cancer (BRCA) expression data from TCGA | TCGA.BRCA.ExpressionData |
| TP53 mutation data for TCGA breast cancer (BRCA) samples | TCGA.BRCA.TP53MutationData |
| A subset of the glioblastoma mutliforme (GBM) data from TCGA. | TCGA.GBM.Demo |
| Glioblastoma Multiforme (GBM) microarray expression data from TCGA | TCGA.GBM.EXPR |
| Glioblastoma Multiforme (GBM) RNASeq expression data from TCGA | TCGA.GBM.ExpressionData |
| TP53 mutation data for TCGA glioblastoma multiforme (GBM) samples | TCGA.GBM.TP53MutationData |
